Clustering

We will select resolution 0.4

Recheck quality of clusters

CD45 expression (immune cells)

Known marker genes

Preliminary annotation

Top markers

Cell composition

High-res annotation

TCR/BCR

Explore the TCR and BCR repertoires captured (if available).

## [1] "Percentage of T cells that have a TCR (TRUE) and don't have one (FALSE)."
## [1] "Percentage of (Plasma)) B cells that have a BCR (TRUE) and don't have one (FALSE)."

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